Onco home

(Biomedical oncology entity annotators' base page)

Annotators' home

• Annotation concepts (mindware)
  • General guidelines for entity annotation
  • Definitions of entity categories for oncology
  • Reference tools
    • Peng Wang's combined lookup tool
    • list of Genes and Malignancies (also available as a Word document)
  • Background reading
  • Pretagging guide
• Annotation tools (software)
  • WordFreak
    • Download/run
    • Setup
    • User's guide
    • Chaining in WordFreak
    • Technical support, WordFreak and general: Eric Pancoast (office: 405, directly opposite Mark Mandel's)
  • Public-use PCs at the IRCS
  • File management (checkout/checkin)
    • LAW system web site
    • Technical Support: Eric Pancoast
    • Recent snapshot of the entire LAW system
  • Training materials [2004-08-16]
  • Relation annotation [2004-10-21]
    • Homepage for relation pilot project [2004-11-04]
    • Wordfreak for relation annotation
    • Relation annotation practice files
• Staying in touch (anywhere)
  • Mailing list
    • About the mailing list: subscribing, password, member list.
    • Mail to: onco-list@ldc.upenn.edu
    • Read the archives
    • About the Mailman system
  • AIM
  • Personal contact information
• Vital administrivia

Annotators' home

2004-11-04